SBML Showcase

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Padraig Gleeson, 16 Jun 2014 16:44


Introduction

Most of the interactions between SBML and LEMS/NeuroML showcased here are enabled by:

Note these features can be accessed easily with the jNeuroML tool. For example:

  • Load LEMSFile.xml using jLEMS, and convert it to SBML format:

     jnml LEMSFile.xml -sbml
    
  • Load SBMLFile.sbml using jSBML, and convert it to LEMS format using values for duration & dt in ms

    jnml -sbml-import SBMLFile.sbml duration dt
    

Note that these features are still in active development!